apparentsens

apparentsens(vis, field='', spw='', intent='', selectdata=True, timerange='', uvrange='', antenna='', scan='', observation='', imsize=[100], cell='"1arcsec"', stokes='I', specmode='mfs', weighting='natural', robust=0.5, npixels=0, uvtaper=[''])[source]

Imaging sensitivity estimataion

[Description] [Examples] [Development] [Details]

Parameters

  • vis ({string, stringArray}) - Name of input visibility file(s)

  • selectdata (bool=True) - Enable data selection parameters

    selectdata = True

    • field ({string, stringArray}=’’) - field(s) to select

    • spw ({string, stringArray}=’’) - spw(s)/channels to select

    • timerange ({string, stringArray}=’’) - Range of time to select from data

    • uvrange ({string, stringArray}=’’) - Select data within uvrange

    • antenna ({string, stringArray}=’’) - Select data based on antenna/baseline

    • scan ({string, stringArray}=’’) - Scan number range

    • observation ({string, int}=’’) - Observation ID range

    • intent ({string, stringArray}=’’) - Scan Intent(s)

  • imsize ({int, intArray}=[100]) - Number of pixels

  • cell ({int, double, intArray, doubleArray, string, stringArray}=‘“1arcsec”’) - Cell size

  • stokes (string=’I’) - Stokes Planes to make (I only, for now)

  • specmode (string=’mfs’) - Spectral definition mode (mfs only, for now)

  • weighting (string=’natural’) - Weighting scheme (natural,uniform,briggs)

    weighting = natural

    • uvtaper (stringArray=[‘’]) - uv-taper on outer baselines in uv-plane

    weighting = briggs

    • robust (double=0.5) - Robustness parameter

    • npixels (int=0) - Number of pixels to determine uv-cell size (0 : -/+ 3 pixels)

    • uvtaper (stringArray=[‘’]) - uv-taper on outer baselines in uv-plane

Description

The apparentsens task calculates the point source sensitivity for the specified selected data, and according to the desired imaging geometry and uv grid weighting. The calculation is performed solely using the weight information stored in the MS WEIGHT column (or WEIGHT_SPECTRUM, if present), and as adjusted by the net imaging weighting function (natural, uniform, robust, taper, etc.). Therefore, it is assumed that the MS WEIGHTs have been properly initialized and calibrated along with the visibility data. As long as the WEIGHTs are in the inverse square units of the visibilities (i.e., inverse variance weights), the calculation should yield a reasonably accurate theoretical imaging sensitivity for data at any stage of the calibration (though data at early and intermediate stages of calibration may not be sufficiently coherent for imaging at high–or even modest–fidelity).

Two values are returned in a dictionary and reported in the logger. First, the apparent sensitivity (in the units implied by the WEIGHTs’ units), for the specified imaging geometry and weighting scheme (dictionary key: ‘effSens’). Second, a unitless factor describing the ratio of the apparent sensitivity to that obtained with pure ’natural’ weighting (the nominal maximum possible sensitivity; dictionary key: ‘relToNat’). When ’natural’ weighting is selected, this ratio factor will be precisely 1.0; all other weighting choices will yield an apparent sensitivity ratio greater than 1.0. I.e., all non-natural weighting schemes are less sensitive (higher rms) than natural.

Currently, apparentsens reports only the continuum sensitivity for the selected data, and in particular, for the aggregate bandwidth indicated by the spectral window selection. The calculation further assumes that the visibility samples are each entirely independent, i.e., that there are no redundant samples such as would occur for overlapping spectral windows. If the per-channel visibility weights reflect their own isolated sensitivity, the reported continuum sensitivity will be over-estimated if the data have been smoothed (i.e., Hanning smoothed channels individually have sensitivity a factor 8/3 times their apparent bandwidth, and this factor is not yet accounted for when forming the continuum sensitivity estimate).

A future version of apparentsens will support reporting a sensitivity spectrum for the spectral line case. For now, spectral line sensitivity may be reasonably estimated by dividing the reported continuum sensitivity by the square root of the fractional bandwidth of a single image channel, or by selecting a bandwidth matching the width of a single image channel. In either case, sufficient care should be applied with respect to the additional per-channel sensitivity introduced by having smoothed (e.g., Hanning) the visilbility, as described above.

Parameter descriptions

The apparentsens task use the same data selection as the tclean task, as well as a subset of the image geometry and weighting parameters. All operate in essentially the same way (with exceptions noted below), and the tclean documentation should be consulted for details on how to set them.

  • specmode : For now, it is only meaningful to use specmode=’mfs’. Use of specmode=’cube’ will be supported in future (and a apparent sensitivity spectrum will be returned and reported).

  • stokes : Currently, apparentsens will report the sensitivity for stokes=’I’ only. Support for polarization-dependent sensitivity estimates will be added in future.

Examples

For a MeasurementSet ‘calibrated.ms’, the continuum imaging sensitivity using natural weighting for field id 3 and a subset of channels in spw 0 can be obtained as follows:

aps=apparentsens(vis='calibrated.ms',
                 spw='0:0~30;40~80',
                 field='3',
                 specmode='mfs',
                 cell='0.007arcsec',imsize=[2048, 2048],
                 weighting='natural')

print aps

The returned dictionary is (also reported in logger):

{'relToNat': 1.0000000000089664, 'effSens':
1.0022319615408699e-05}

Note that the ‘relToNat’ factor is 1.0.

For the same MS and selection, but with Briggs weighting:

aps=apparentsens(vis='calibrated.ms',
                 spw='0:0~30;40~80',
                 field='3',
                 specmode='mfs',
                 cell='0.007arcsec',imsize=[2048, 2048],
                 weighting='briggs',
                 robust=0.5)

print aps

The returned dictionary is (also reported in logger):

{'relToNat': 1.1450564209993626, 'effSens':
1.1476121428828694e-05}

Note that Briggs weighting is ~14% less sensitive in this case.

Development

No additional development details

Parameter Details

Detailed descriptions of each function parameter

vis ({string, stringArray}) - Name(s) of input visibility file(s)
default: none;
example: vis=’ngc5921.ms’
vis=[‘ngc5921a.ms’,’ngc5921b.ms’]; multiple MSes
field ({string, stringArray}='') - Select fields to image or mosaic. Use field id(s) or name(s).
[‘go listobs’ to obtain the list id’s or names]
default: ‘’= all fields
If field string is a non-negative integer, it is assumed to
be a field index otherwise, it is assumed to be a
field name
field=’0~2’; field ids 0,1,2
field=’0,4,5~7’; field ids 0,4,5,6,7
field=’3C286,3C295’; field named 3C286 and 3C295
field = ‘3,4C*’; field id 3, all names starting with 4C
For multiple MS input, a list of field strings can be used:
field = [‘0~2’,’0~4’]; field ids 0-2 for the first MS and 0-4
for the second
field = ‘0~2’; field ids 0-2 for all input MSes
spw ({string, stringArray}='') - Select spectral window/channels
NOTE: channels de-selected here will contain all zeros if
selected by the parameter mode subparameters.
default: ‘’=all spectral windows and channels
spw=’0~2,4’; spectral windows 0,1,2,4 (all channels)
spw=’0:5~61’; spw 0, channels 5 to 61
spw=’<2’; spectral windows less than 2 (i.e. 0,1)
spw=’0,10,3:3~45’; spw 0,10 all channels, spw 3,
channels 3 to 45.
spw=’0~2:2~6’; spw 0,1,2 with channels 2 through 6 in each.
For multiple MS input, a list of spw strings can be used:
spw=[‘0’,’0~3’]; spw ids 0 for the first MS and 0-3 for the second
spw=’0~3’ spw ids 0-3 for all input MS
spw=’3:10~20;50~60’ for multiple channel ranges within spw id 3
spw=’3:10~20;50~60,4:0~30’ for different channel ranges for spw ids 3 and 4
spw=’0:0~10,1:20~30,2:1;2;3’; spw 0, channels 0-10,
spw 1, channels 20-30, and spw 2, channels, 1,2 and 3
spw=’1~4;6:15~48’ for channels 15 through 48 for spw ids 1,2,3,4 and 6
intent ({string, stringArray}='') - Scan Intent(s)
default: ‘’ (all)
example: intent=’TARGET_SOURCE’
example: intent=’TARGET_SOURCE1,TARGET_SOURCE2’
example: intent=’TARGET_POINTING*’
selectdata (bool=True) - Enable data selection parameters.
timerange ({string, stringArray}='') - Range of time to select from data
default: ‘’ (all); examples,
timerange = ‘YYYY/MM/DD/hh:mm:ss~YYYY/MM/DD/hh:mm:ss’
Note: if YYYY/MM/DD is missing date defaults to first
day in data set
timerange=’09:14:0~09:54:0’ picks 40 min on first day
timerange=’25:00:00~27:30:00’ picks 1 hr to 3 hr
30min on NEXT day
timerange=’09:44:00’ pick data within one integration
of time
timerange=’> 10:24:00’ data after this time
For multiple MS input, a list of timerange strings can be
used:
timerange=[‘09:14:0~09:54:0’,’> 10:24:00’]
timerange=’09:14:0~09:54:0’’; apply the same timerange for
all input MSes
uvrange ({string, stringArray}='') - Select data within uvrange (default unit is meters)
default: ‘’ (all); example:
uvrange=’0~1000klambda’; uvrange from 0-1000 kilo-lambda
uvrange=’> 4klambda’;uvranges greater than 4 kilo lambda
For multiple MS input, a list of uvrange strings can be
used:
uvrange=[‘0~1000klambda’,’100~1000klamda’]
uvrange=’0~1000klambda’; apply 0-1000 kilo-lambda for all
input MSes
antenna ({string, stringArray}='') - Select data based on antenna/baseline
default: ‘’ (all)
If antenna string is a non-negative integer, it is
assumed to be an antenna index, otherwise, it is
considered an antenna name.
antenna=’5&6’; baseline between antenna index 5 and
index 6.
antenna=’VA05&VA06’; baseline between VLA antenna 5
and 6.
antenna=’5&6;7&8’; baselines 5-6 and 7-8
antenna=’5’; all baselines with antenna index 5
antenna=’05’; all baselines with antenna number 05
(VLA old name)
antenna=’5,6,9’; all baselines with antennas 5,6,9
index number
For multiple MS input, a list of antenna strings can be
used:
antenna=[‘5’,’5&6’];
antenna=’5’; antenna index 5 for all input MSes
antenna=’!DV14’; use all antennas except DV14
scan ({string, stringArray}='') - Scan number range
default: ‘’ (all)
example: scan=’1~5’
For multiple MS input, a list of scan strings can be used:
scan=[‘0~100’,’10~200’]
scan=’0~100; scan ids 0-100 for all input MSes
observation ({string, int}='') - Observation ID range
default: ‘’ (all)
example: observation=’1~5’
imsize ({int, intArray}=[100]) - Number of pixels
example : imsize = [350,250]
imsize = 500 is equivalent to [500,500]
To take proper advantage of internal optimized FFT routines, the
number of pixels must be even and factorizable by 2,3,5,7 only.
cell ({int, double, intArray, doubleArray, string, stringArray}='"1arcsec"') - Cell size
example: cell=[‘0.5arcsec,’0.5arcsec’] or
cell=[‘1arcmin’, ‘1arcmin’]
cell = ‘1arcsec’ is equivalent to [‘1arcsec’,’1arcsec’]
stokes (string='I') - Stokes Planes to make (I only, for now)
default=’I’; example: stokes=’IQUV’;
Options: ‘I’,’Q’,’U’,’V’,’IV’,’QU’,’IQ’,’UV’,’IQUV’,’RR’,’LL’,’XX’,’YY’,’RRLL’,’XXYY’,’pseudoI’
Note : Due to current internal code constraints, if any correlation pair
is flagged, by default, no data for that row in the MS will be used.
So, in an MS with XX,YY, if only YY is flagged, neither a
Stokes I image nor an XX image can be made from those data points.
In such a situation, please split out only the unflagged correlation into
a separate MS.
Note : The ‘pseudoI’ option is a partial solution, allowing Stokes I imaging
when either of the parallel-hand correlations are unflagged.
The remaining constraints shall be removed (where logical) in a future release.
specmode (string='mfs') - Spectral definition mode (mfs only, for now)
mode=’mfs’ : Continuum imaging with only one output image channel.
(mode=’cont’ can also be used here)
mode=’cube’ : Spectral line imaging with one or more channels
Parameters start, width,and nchan define the spectral
coordinate system and can be specified either in terms
of channel numbers, frequency or velocity in whatever
spectral frame is specified in ‘outframe’.
All internal and output images are made with outframe as the
base spectral frame. However imaging code internally uses the fixed
spectral frame, LSRK for automatic internal software
Doppler tracking so that a spectral line observed over an
extended time range will line up appropriately.
Therefore the output images have additional spectral frame conversion
layer in LSRK on the top the base frame.
(Note : Even if the input parameters are specified in a frame
other than LSRK, the viewer still displays spectral
axis in LSRK by default because of the conversion frame
layer mentioned above. The viewer can be used to relabel
the spectral axis in any desired frame - via the spectral
reference option under axis label properties in the
data display options window.)

mode=’cubedata’ : Spectral line imaging with one or more channels
There is no internal software Doppler tracking so
a spectral line observed over an extended time range
may be smeared out in frequency. There is strictly
no valid spectral frame with which to label the output
images, but they will list the frame defined in the MS.
weighting (string='natural') - Weighting scheme (natural,uniform,briggs,superuniform,radial)
During gridding of the dirty or residual image, each visibility value is
multiplied by a weight before it is accumulated on the uv-grid.
The PSF’s uv-grid is generated by gridding only the weights (weightgrid).
weighting=’natural’ : Gridding weights are identical to the data weights
from the MS. For visibilities with similar data weights,
the weightgrid will follow the sample density
pattern on the uv-plane. This weighting scheme
provides the maximum imaging sensitivity at the
expense of a possibly fat PSF with high sidelobes.
It is most appropriate for detection experiments
where sensitivity is most important.
weighting=’uniform’ : Gridding weights per visibility data point are the
original data weights divided by the total weight of
all data points that map to the same uv grid cell :
‘ data_weight / total_wt_per_cell ‘.
The weightgrid is as close to flat as possible resulting
in a PSF with a narrow main lobe and suppressed
sidelobes. However, since heavily sampled areas of
the uv-plane get down-weighted, the imaging
sensitivity is not as high as with natural weighting.
It is most appropriate for imaging experiments where
a well behaved PSF can help the reconstruction.
weighting=’briggs’ : Gridding weights per visibility data point are given by
‘data_weight / ( A / total_wt_per_cell + B ) ‘ where
A and B vary according to the ‘robust’ parameter.
robust = -2.0 maps to A=1,B=0 or uniform weighting.
robust = +2.0 maps to natural weighting.
(robust=0.5 is equivalent to robust=0.0 in AIPS IMAGR.)
Robust/Briggs weighting generates a PSF that can
vary smoothly between ‘natural’ and ‘uniform’ and
allow customized trade-offs between PSF shape and
imaging sensitivity.
weighting=’superuniform’ : This is similar to uniform weighting except that
the total_wt_per_cell is replaced by the
total_wt_within_NxN_cells around the uv cell of
interest. ( N = subparameter ‘npixels’ )
This method tends to give a PSF with inner
sidelobes that are suppressed as in uniform
weighting but with far-out sidelobes closer to
natural weighting. The peak sensitivity is also
closer to natural weighting.
weighting=’radial’ : Gridding weights are given by ‘ data_weight * uvdistance ‘
This method approximately minimizes rms sidelobes
for an east-west synthesis array.
For more details on weighting please see Chapter3
of Dan Briggs’ thesis (http://www.aoc.nrao.edu/dissertations/dbriggs)
robust (double=0.5) - Robustness parameter for Briggs weighting.
robust = -2.0 maps to uniform weighting.
robust = +2.0 maps to natural weighting.
(robust=0.5 is equivalent to robust=0.0 in AIPS IMAGR.)
npixels (int=0) - Number of pixels to determine uv-cell size for super-uniform weighting
(0 defaults to -/+ 3 pixels)
npixels – uv-box used for weight calculation
a box going from -npixel/2 to +npixel/2 on each side
around a point is used to calculate weight density.
npixels=2 goes from -1 to +1 and covers 3 pixels on a side.
npixels=0 implies a single pixel, which does not make sense for
superuniform weighting. Therefore, if npixels=0 it will
be forced to 6 (or a box of -3pixels to +3pixels) to cover
7 pixels on a side.
uvtaper (stringArray=['']) - uv-taper on outer baselines in uv-plane
Apply a Gaussian taper in addition to the weighting scheme specified
via the ‘weighting’ parameter. Higher spatial frequencies are weighted
down relative to lower spatial frequencies to suppress artifacts
arising from poorly sampled areas of the uv-plane. It is equivalent to
smoothing the PSF obtained by other weighting schemes and can be
specified either as a Gaussian in uv-space (eg. units of lambda)
or as a Gaussian in the image domain (eg. angular units like arcsec).
uvtaper = [bmaj, bmin, bpa]
NOTE: the on-sky FWHM in arcsec is roughly the uv taper/200 (klambda).
default: uvtaper=[]; no Gaussian taper applied
example: uvtaper=[‘5klambda’] circular taper
FWHM=5 kilo-lambda
uvtaper=[‘5klambda’,’3klambda’,’45.0deg’]
uvtaper=[‘10arcsec’] on-sky FWHM 10 arcseconds
uvtaper=[‘300.0’] default units are lambda
in aperture plane